Japex Report: CheminfoBench

Global Parameters

configFile: mx-cdk-substructure.xml
chartType: barchart
classPath: build/classes
dateTime: 22 Jan 2009/07:34:59 PST
hostName: jupiter
numberOfCpus: 2
numberOfThreads: 1
osArchitecture: i386
osName: Linux
plotDrivers: false
plotGroupSize: 5
reportsDirectory: build/reports
resultAxis: normal
resultAxisX: normal
resultUnit: ms
runIterations: 10
runsPerDriver: 1
version: 1.1.0
vmInfo: Sun Microsystems Inc. 1.5.0_16-b02
warmupIterations: 10
warmupsPerDriver: 0

Result Summary (ms)

driver	resultAritMean	resultGeomMean	resultHarmMean
CDK-1.2.x	277.225	277.225	277.225
mx-0.108.1	58.842	58.842	58.842

Driver: CDK-1.2.x

classPath: build/classes ./lib/cdk-1.2.x-20090116.jar
driverClass: net.openmolecules.benchmark.driver.CDKSubstructureBench
description: Finds all substructures in a set of hydrogen-suppressed structures.

testCase	inputFile	resultIterations	resultTime	resultValue
Read 416-Record PubChem SD File and Find All Substructure Matches to Benzene in Each Hydrogen-Suppressed Structure	data/pubchem_416_benzenes.sdf	10.000	2.772	277.225

Driver: mx-0.108.1

classPath: build/classes ./lib/mx-0.108.1.jar
driverClass: net.openmolecules.benchmark.driver.MXSubstructureBench
description: Finds all substructures in a set of hydrogen-suppressed structures.

testCase	inputFile	resultIterations	resultTime	resultValue
Read 416-Record PubChem SD File and Find All Substructure Matches to Benzene in Each Hydrogen-Suppressed Structure	data/pubchem_416_benzenes.sdf	10.000	0.588	58.842

Results Per Test

Generated using Japex version 1.1.0