net.sf.octet.test
Class MoleculeQueryBuilderTest

java.lang.Object
  junit.framework.Assert
      junit.framework.TestCase
          net.sf.octet.test.OctetTestCase
              net.sf.octet.test.MoleculeQueryBuilderTest

All Implemented Interfaces:

junit.framework.Test

public class MoleculeQueryBuilderTest

extends OctetTestCase

A set of tests for MoleculeQueryBuilder functionality.

Author:

Richard Apodaca

Constructor Summary

MoleculeQueryBuilderTest()
Default constructor.

Method Summary

void	testUnsaturatedNitrogenAtomQuery() Verifies that a unilateral MoleculeQuery consisting of a single AtomQuery matching an unsaturated nitrogen atom matches pyridine, but not benzene.
void	testWildcardAromatic() Verifies that a MoleculeQuery designed to match the SMARTS pattern "c1*cccc1" will match both pyridine and benzene.

Methods inherited from class net.sf.octet.test.OctetTestCase

getMoleculeBuilder

Methods inherited from class junit.framework.TestCase

countTestCases, createResult, getName, run, run, runBare, runTest, setName, setUp, tearDown, toString

Methods inherited from class junit.framework.Assert

assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertFalse, assertFalse, assertNotNull, assertNotNull, assertNotSame, assertNotSame, assertNull, assertNull, assertSame, assertSame, assertTrue, assertTrue, fail, fail

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

MoleculeQueryBuilderTest

public MoleculeQueryBuilderTest()

Default constructor.

Method Detail

testWildcardAromatic

public void testWildcardAromatic()

Verifies that a MoleculeQuery designed to match the SMARTS pattern "c1*cccc1" will match both pyridine and benzene.

testUnsaturatedNitrogenAtomQuery

public void testUnsaturatedNitrogenAtomQuery()

Verifies that a unilateral MoleculeQuery consisting of a single AtomQuery matching an unsaturated nitrogen atom matches pyridine, but not benzene.